A cranky biologist who means well. My hobbies include long walks off short piers and anything science related.

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Joined 1 year ago
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Cake day: June 25th, 2023

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  • I meditate as part of a dedicated yoga practice. When I am doing a group practice, i arrive early and perform a physical warm up and then spend ten minutes in a seated meditation before the class begins. It makes a huge difference in the quality of my workout to get my mind firmly rooted in the immediate experience.


  • Back when Perl was the language of choice for bioinformatics, I found a huge performance boost pre-processing large (~1Tb) text files using built in unix tools like sed and awk with regex. So while it might take me a full hour to peck out the correct incantation, the task would then run in an hour, compared to four hours or more for the same task using Perl.

    So many pipes…